Coulomb blockade model of permeation and selectivity in biological ion channels
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License | CC Attribution 3.0 Unported: You are free to use, adapt and copy, distribute and transmit the work or content in adapted or unchanged form for any legal purpose as long as the work is attributed to the author in the manner specified by the author or licensor. | |
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Electric power distributionModel buildingCoulomb blockadeSelectivity (electronic)Particle physicsPlain bearingVideoSizingIonSeparation processSelectivity (electronic)Effects unitPaperBird vocalizationDiffusionPlain bearingFirearmComputer animationMeeting/Interview
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Model buildingSelectivity (electronic)Black holeCylinder (geometry)Water vaporElectronic mediaDielectricNegative feedbackAcoustic membraneCellular manufacturingElectric currentElectrical conductorResonanceCoulomb blockadeEffects unitSelectivity (electronic)NeutronenaktivierungConductivity (electrolytic)AtomismQuantum dotModel buildingCoulomb blockadeRemotely operated underwater vehicleIonEffects unitNanotechnologyCoalQuantumGreyResonance (chemistry)PaperElektrostatische AufladungLocherFundamental frequencyWater vaporDie proof (philately)Diagram
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Glass
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MikromanipulatorCell (biology)
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Cell (biology)
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IonValve amplifierComputer animation
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Valve amplifierElectric currentComputer animation
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Magnetic resonance imagingIonModel buildingCoulomb blockadeEngineering drawingDiagramDrawing
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Anomaly (physics)Valence bandSelectivity (electronic)Filter (optics)Effects unitParticle physicsModel buildingCoulomb blockadeDielectricVideoPhysicistPlain bearingPaperModel buildingComputer animation
Transcript: English(auto-generated)
00:08
What we are doing is applying physics to biological ion channels and we find that we can reveal several features of channel function that are only explicable in terms of physics.
00:23
These include, for example, the selectivity of one ion over another. For example, calcium goes through a calcium channel a thousand times better than sodium, even though the two ions are essentially the same size. We are also able to explain the rapid conduction
00:47
because despite the selectivity, the ions go through almost at the rate of free diffusion, in other words, almost as though the channel were an open hole. We can also explain phenomena
01:00
in mutation. In our paper, we contend that these effects are all explicable in terms of Coulomb blockade, a phenomenon that also happens in quantum dots. This was an insight due to Igor Kaufman. An ion channel is a very complicated object, contains from thousands of atoms. We claim
01:28
that its conduction and selectivity can be explained by simple electrostatics model similar to quantum dots. We consider a simple model of ion channel which is represented
01:48
as water filled hole in protein wall. We show in the paper that ion channel represents has zero conduction, which is Coulomb blockade, in the points where captured ions neutralize
02:09
QF. A resonant conduction occurs in the middle point between neighboring neutralization points. These equations are identical to those appearing in quantum dots. But the
02:27
we definitely need more crucial proofs for our theory and that is what we wait for our friends biologists.
02:41
The Coulomb blockade model does appear to explain some very interesting and fundamental observations of ion channel activity. And these are of course fundamental to our understanding of ion channels. Elena will now demonstrate the Patek-Klatt technique. She needs to backfill a glass
03:02
electrode with solution of known ion content. By doing this she will control the conditions of the experiment. She also needs to micromanipulate the glass pipette to the plasma membrane of a single cell. And this cell will be expressing an ion channel of choice. The pipette is
03:27
connected to a very sensitive amplifier which is able to record ions moving through the ion channel pore and it records them as an electrical current.
03:41
Given that the Coulomb blockade model can explain so many features of biological ion channels, features that were previously not understood, we physicists are confident that it's correct and that it will be validated by the experiments being done by Elena and Stephen. For details please read our paper.