Lecture Designing Organic Syntheses 14 - 25.11.14
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00:00
GastrinPotenz <Homöopathie>Elimination reactionBiosynthesisReactivity (chemistry)Organ donationReaction mechanismMoleculeRiver deltaWursthülleBiomolecular structureRetrosynthetic analysisNucleophilic substitutionAcidDerivative (chemistry)Functional groupAromatic hydrocarbonSodiumPyrogallolSubstitutionsreaktionKernproteineSuperbaseCryogenicsConnective tissueCombine harvesterSpeciesAgeingAdamantaneSystemic therapyBleitetraethylHydro TasmaniaWine tasting descriptorsLeakProteinHybridisierung <Chemie>TeaLecture/Conference
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Connective tissuePyrogallolProteinHydrolysatMoleculeFunctional groupPyrroleAromaticityAlpha particleLecture/Conference
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PhenylhydrazineIodideSetzen <Verfahrenstechnik>CyclohexanonIonenbindungImineAnilineLigandMoleculeBase (chemistry)StickstoffatomTautomerFunctional groupPalladiumSystemic therapyKetoneMetabolic pathwayReducing agentAcidRearrangement reactionElimination reactionBiosynthesisToll-like receptorTumorSense DistrictChlorideMan pageHope, ArkansasCycloalkaneBromideAgeingUranhexafluoridWursthülleTeaMeatHydrazineProlineLecture/Conference
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14:42
DichlordioxocyclohexadiendicarbonitrilIronBiosynthesisAmmonium acetateThermoformingAcidAqueous solutionPyridineDichlordioxocyclohexadiendicarbonitrilEnolChlorideAldehydeDoppelbindungGesundheitsstörungDerivative (chemistry)Carbon (fiber)Yield (engineering)Retrosynthetic analysisAcetoacetic acidReactivity (chemistry)ElektronenakzeptorSetzen <Verfahrenstechnik>IsomerAmmoniumOxideHydro TasmaniaDiet foodSet (abstract data type)ProtonationHydrogenAcetateTeaWursthülleFormaldehydeLecture/Conference
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Ammonium acetateSurface scienceDyeingAction potentialMichael-AdditionMoleculeHydro TasmaniaKetoneProcess (computing)DyeOrlistatCondensationAzo couplingBiosynthesisPyridineAcetoacetic acidEsterDiketonePentaneLecture/Conference
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Process (computing)Reaction mechanismOrlistatSystemic therapyCondensationBaton (law enforcement)StickstoffatomMoleculePyridineBreed standardQuinolineAcetoneElimination reactionKetoneProtonationWaterAnilineLecture/Conference
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AcidAageFiningsTransformation <Genetik>Chemical compoundChemical structureRearrangement reactionMixtureCardiac arrestPotenz <Homöopathie>Chemical reactionPhotochemistryCarbon (fiber)Functional groupProteinDerivative (chemistry)MoleculeFreezingWaterOctane ratingHuman subject researchNecking (engineering)LevomethadonZinc chlorideNitroverbindungenEtomidateIsomerCyclische VerbindungenPhenolBiosynthesisHydrocarboxylierungAnilineOzonolyseLecture/Conference
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Grignard-ReaktionCarbonylverbindungenOrgan donationFunctional groupAldehydeHydrideHydrocarboxylierungConnective tissueChemical structureAcid anhydrideReactivity (chemistry)ElektronenakzeptorIsomerBiosynthesisConjugated systemChemical reactionKetoneHydrolysatChlorideWursthülleTransformation <Genetik>TeaMolecularityRegent <Diamant>Aluminium hydrideAnimal trappingLecture/Conference
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Systemic therapyFunctional groupGesundheitsstörungBleitetraethylYield (engineering)Hydro TasmaniaChemical reactionIceCondensationStickstoffatomChemical structureBiochemistryBiosynthesisAmino acidSurface scienceTalcRefrigeratorNaturstoffOxideAusgangsgesteinHydrogen peroxideAmineAldehydeAcidAmine oxideHydrogenCyclische VerbindungenHydroxylSetzen <Verfahrenstechnik>Lecture/Conference
Transcript: English(auto-generated)
00:05
Welcome to part 14 of the lecture on designing organic syntheses. In the preceding lesson we discussed the synthesis and the retrosynthetic analysis of five-membered heterines.
00:25
Today we will start with an example for an annihilated five-membered heterine. And you will soon notice that our target molecule is an indole derivative.
00:51
We have a pyro nucleus here, benzo-annulated, then it is indole.
01:01
And with an additional six-membered ring we call that a carbazole. And in that case this would be a tetrahydrocarbazole.
01:23
And again, of course, it is an indole derivative. So, retrosynthetic analysis, one suggestion should be disconnecting here.
01:51
Then we would presumably choose to have the donator reactivity at this position.
02:05
This is in accord with the natural reactivity here. We have the delta minus there. And except a reactivity here, just let us put an X there as a leaving group.
02:25
However, you of course know that just heating up and hoping for a nucleophilic substitution won't work. Because nucleophilic substitution is feasible at sp3 hybridized centers.
02:46
Not that easy here at an arene, especially not if it is an electron-rich arene as in this case. Then the normal nucleophilic aromatic substitution with an addition elimination mechanism doesn't work.
03:08
There is another nucleophilic aromatic substitution with an elimination addition mechanism with arenes as reactive intermediates.
03:27
And this is the case here that it works. It is reported. So, indeed, applying a super base system, in this case sodium amide, in combination with sodium tertiary butoxide,
03:57
well, a super base, starting at low temperature and then heating it up, well, this works.
04:10
But in this case we have, as an intermediate, of course deprotonated at the acidic NH group, sodium here.
04:25
And then, as I said, elimination addition process, an elimination here forming this arene.
04:43
Highly reactive species there, nucleophilic center there, should give the C-C connection.
05:07
Okay. And since this here is acidic alpha to the imine, it will be deprotonated here, this will be protonated. And then we have already the aromatic pyrrole moiety formed there and the target molecule just by acidic hydrolysis.
05:53
So, this is one possible retrosynthetic pathway.
06:04
Let's have a look at another one. Just disconnecting here. Well, by the way, I should add, one could think about using palladium catalysis for forming this C-C bond.
06:28
Well, it would just be a trie using a palladium zero catalyst with an additional base.
06:47
Then an oxidative addition should occur into the C-X bond for X could be chloride, bromide or iodide.
07:13
Well, in this case, we should keep in mind also that we have an equilibrium here.
07:29
Generally, the imine is preferred in the imine tautomerism.
07:44
Nevertheless, if we have this one or the imine, the base will deprotonate and we have the nucleophile. And, well, hopefully, H-X is eliminated under the influence of the base and we would get this intermediary six-membered palladium cycle,
08:34
which easily should eliminate palladium zero reductive elimination under C-C bond formation.
08:57
And after tautomerization, we would then get our target molecule.
09:04
Well, okay, should work with the right correct choice of ligands, with appropriate ligands it should work. However, I looked it up in Sitefinder and couldn't find that published. Well, maybe one of you will have a try.
09:27
Let's go to R2. This disconnection would lead us to an aniline with this cyclohexanone moiety in ortho.
10:09
Well, actually, we just need nucleophilic nitrogen here and here, just two leaving groups.
10:27
Could be a ketone or it could be an imine. And this is especially interesting, since we could then draw the tautomer, which is, of course, unstable, but rather interesting,
11:10
since, well, you already notice where we will get to, to this system capable to undergo a diazo-cope rearrangement.
11:48
And we all know, under acidic treatment, heating it up, this works
12:06
directly tautomerizes to this one and eliminates NH3, delivering the target molecule.
12:23
And, well, this is then the preferred synthesis of our target molecule, just starting with phenylhydrazine plus cyclohexanone.
12:52
First, under acidic conditions, for instance, in ethanol, forming the hydrazone, and then secondly, heating it up.
13:05
This is sufficient for producing that target in rather satisfying yields. And as you know, this is called the Fischer-Indole synthesis.
13:34
Let's have a look at the synthesis of six-membered nitrogen heterines,
13:44
for instance, pyridines, certainly the most important class of heterocycles, of nitrogen heterocycles.
14:11
R should be just any substituent, alkyl or aryl, E should be an ester, let's choose just an ethyl ester.
14:35
So, we have an imine functionality on this side, an enamine functionality on the other side.
14:44
So, straightforward disconnection means that we could get to this structure for sure.
15:12
Using something like that and treating it with just ammonium acetate will deliver the pyridine derivative.
15:23
We could try to disconnect here. Okay, we will have a look at a similar case, this is then the preferred disconnection.
15:53
However, if you think of getting rid of that double bond here, then we have a highly symmetrical setup.
16:25
And in the ongoing retrosynthetic analysis, we could just assume we have here donator reactivity, there donator reactivity.
16:58
This is of course the natural reactivity of acetoacetic ester, just deprotonating there or also forming the enol under acidic conditions.
17:10
On the other hand, we need a carbon with double acceptor reactivity and as
17:25
you all know, the synthetic equivalent of something like that is simply an aldehyde.
17:44
So, plus two equivalents of acetoacetic acid, and indeed, if we put
18:05
those reagents together with ammonium acetate, then we can nicely produce a dihydropyridine.
18:41
Usually the 1,4 isomer and then oxidizing.
19:03
For oxidizing it, you could use for instance, iron chloride or these oxidizing agents like DDQ or maybe just oxygen, air plus a catalyst.
19:40
For instance, this one with R is just a hydrogen, that means that aqueous form
19:58
aldehyde was applied, then this product was reported as isolated with a 93% yield.
20:14
This type of pyridine synthesis is known as the hunch pyridine synthesis, which can be
20:43
stopped at the stage of the dihydropyridine, then it's of course the hunch dihydropyridine synthesis.
21:02
Similarly, you can analyze the synthesis or retrosynthetic analysis, you can analyze the potential synthesis of this target
21:22
molecule, and now in this case, it's obvious that it could be a good idea to disconnect here,
21:57
getting to this pentane dione and acetoacetic acid, ester.
22:11
So again, just treating with ammonium acetate will be sufficient to get that
22:23
all three component coupling process, condensation process done to get to the pyridine. As an alternative to this diketone, one could also choose this alkyneone, so
22:51
then the nucleophile would attack here in, well, as a Michael addition process.
23:02
Finally, with the same result. Now to annihilated systems, benzo-analated pyridines are called quinolines or isoquinolines, if the nitrogen is at the two position.
23:51
Let's analyze this target, disconnecting here.
24:29
This alpha-beta unsaturated ketone certainly derives from a condensation process of that ketone with acetone.
24:55
Well, actually, if we put those together, I would assume that, first of
25:05
all, the condensation process will take place between the aniline and the acetone.
25:30
Imine, enamine, tautomerie.
25:56
Now, here we have the nucleophile, there we have the electrophile.
26:03
All standard mechanism, protonation here, deprotonation there, elimination of water gives our target molecule.
26:51
So, one problem which should be solved is, how could we synthesize something like that?
27:11
Well, in literature you will find two ways for getting to structures like that.
27:27
One is having a nitro compound and selectively reducing that.
27:44
Well, I'm a bit surprised that it should be that easy to introduce that selectively. Alpha-2-CH acidic compound and then selectively reduce that without reducing the carbonyl group.
28:10
But it seems to be the preferred method. However, there is this nice way for a transformation.
28:32
Start with the aniline isolation and then a rearrangement.
28:41
This is then the so-called, one example of a freeze rearrangement. It is possible with carboxylic acid amides.
29:02
The normal freeze rearrangement is with an ester, with a phenol ester, but it works with amides. Just treating that with a Lewis acid like zinc chloride. And it will go to the awful position if you have blocked the power position.
29:24
Without blocking the power position then normally you get a mixture. And there is also the possibility to accelerate this reaction photochemically and then it's the photofreeze rearrangement.
29:51
So, photofreeze rearrangement in brackets.
30:02
So, next subject. Let's have a look at isoquinalins. And as an exercise you already thought about structures like that.
30:26
Well, okay. Most of you decided to disconnect here.
30:42
Certainly not a bad idea. Well, you have the problem with this trans isomers.
31:23
Well, however, chances are not that bad that under the influence of Bronsted acid you get the isomerization done. And as soon as this structure occurs it will react and give the cyclization.
31:59
Targeting this structure we could think of disconnecting here R1.
32:29
Just an idea. How could we get such a setup? Well, also just a spontaneous idea.
32:52
One moment, we have an R group here. So, okay, ozonolysis of an indine derivative.
33:09
Why not? Maybe because we would now have to think about how we synthesize this one. Okay.
33:20
And on the other hand, some of you suggested that we could change oxidation state.
34:01
Well, ending up at this structure with an aldehyde and a keto functionality in ortho position.
34:27
Well, I'm not sure. However, going on in that analysis one could think about do we have a way to get the transformation done from here to this one.
35:03
Let's see. Maybe we could reduce that carboxylic anhydride with a complex hydride which delivers just stoichiometrically one hydride.
35:25
So, diisobutylaluminum hydride could be a reagent of choice.
35:42
So, first diisobutylaluminum hydride, then secondly trapping with TMS chloride would give this lactone.
36:07
And then, maybe with just a grignard reagent.
36:45
Well, okay, hydrolysis should give this one, just call it B whatsoever.
37:06
Yes, one could try that. Nevertheless, let us have a look at alternatives.
37:42
As it will turn out, especially nice is thinking about a disconnection. Here you will see that we will then soon get to, well, classical isoquinalin synthesis.
38:24
Here, donator reactivity, there the acceptor reactivity. In this case, we have the special problem, the serious problem, that we would have to deal with cis-trans isomers.
38:50
And since this is not conjugated to any carbonyl group, here in the case we discussed before,
39:02
we had the carbonyl group at least in conjugation through that phenylene moiety. But here, well, we can assume that indeed preferentially we would have the trans isomer with not an appropriate tendency for isomerization.
39:30
So, and this connection here, well, it looks like an intramolecular Friedel-Crafts reaction.
39:52
With the leaving group here, best would be a chloride.
40:01
So, again, we have the problem, cis-trans isomers. Well, we should therefore consider that we skip that double bond there.
40:28
There are no problem with cis-trans isomerization. If we just have CH2CH2, we will have to do an oxidation step within our synthesis.
40:42
Or we add retrosynthetically water to the double bond.
41:11
That means in the synthesis we just have to eliminate water.
41:24
So, where do we get such an imidoyl chloride from? Well, simply from the corresponding carboxylic acid amide, treating that with phosphor oxychloride.
42:01
And the same here, of course, for this case.
42:23
So, and obviously you get these amides from the reaction of the free amine with, for instance, the acid chlorides.
42:42
Treating this with phosphor oxychloride or that with phosphor oxychloride, it goes all the way to our target molecule. And starting from such a hydroxy amine,
43:16
then the isoquinaline synthesis is called the Pictegams isoquinaline synthesis,
43:42
having just the amine and including one oxidizing step.
44:12
Well, actually, the oxidizing step is the one on the stage of the dihydroisoquinaline.
44:37
So, but nevertheless, this is called the Bieschler-Napieralski isoquinaline synthesis.
44:56
Now imagine that we change the oxidation state at that carbon.
45:18
We could do so in our retrosynthetic analysis, changing the oxidation state to this compound,
45:45
well, which obviously is the product of the condensation reaction with an aldehyde.
46:05
Then this intermediary amine, just treating that under acidic condition,
46:29
will deliver this tetrahydroisoquinaline.
46:42
And indeed, this reaction producing a tetrahydroisoquinaline with stereogenic center, usually here, is a biomimetic one. There are lots of natural products with that structure and also in living systems, this reaction occurs.
47:14
Condensation of such an amine with an aldehyde and under acidic catalysis,
47:23
we get to the tetrahydroisoquinalines. This is the synthesis following Pick-T-Spengler.
47:40
And of course, you could then oxidize under more vigorous conditions to get to the aromatic isoquinaline.
48:06
While oxidizing under more vigorous conditions, one should pay attention that you don't oxidize that nitrogen to the N-oxide. This is, of course, possible with peroxides, hydrogen peroxide, for instance.
48:29
One last example for an isoquinaline synthesis, which is also used for the synthesis of the parent isoquinaline.
48:44
But we will just have a look at this example with an additional hydroxy group, this phenolic isoquinaline.
49:05
You could disconnect here.
49:22
So, amine functionality, the cyclization is also of Friedel-Crafts type.
49:54
You would then start from this aldehyde and this amine with that acetal functionality, this you can buy.
50:24
Combining these under slightly acidic conditions from 0°C to room temperature, 48 hours and 46% yield is reported.
50:48
This is a nice example for the so-called Pomerantz fridge isoquinaline synthesis.
51:10
So, I think enough for today. Thanks for listening. See you tomorrow.
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